IL_6BZ6_118

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

AGAAG*UGGU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_118 not in the Motif Atlas

Homologous match to IL_7RQB_060

Geometric discrepancy: 0.1257

The information below is about IL_7RQB_060

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_07235.1

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

6BZ6|1|RA|A|1469
6BZ6|1|RA|G|1470
6BZ6|1|RA|A|1471
6BZ6|1|RA|A|1472
6BZ6|1|RA|G|1473
*
6BZ6|1|RA|U|1520
6BZ6|1|RA|G|1521
6BZ6|1|RA|G|1522
6BZ6|1|RA|U|1523

Current chains

Chain RA

23S rRNA

Nearby chains