3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CG*UGG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_154 not in the Motif Atlas
Homologous match to IL_7A0S_088
Geometric discrepancy: 0.1055
The information below is about IL_7A0S_088
Detailed Annotation
Major groove platform
Broad Annotation
No text annotation
Motif group
IL_07039.3
Basepair signature
cWW-L-cWW
Number of instances in this motif group
16

Unit IDs

6BZ6|1|RA|C|2507
6BZ6|1|RA|G|2508
*
6BZ6|1|RA|U|2580
6BZ6|1|RA|G|2581
6BZ6|1|RA|G|2582

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3

Coloring options:


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