IL_6BZ6_158

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

6BZ6|1|RA|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_158 not in the Motif Atlas

Homologous match to IL_7RQB_101

Geometric discrepancy: 0.1791

The information below is about IL_7RQB_101

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

6BZ6|1|RA|C|2591
6BZ6|1|RA|G|2592
*
6BZ6|1|RA|C|2601
6BZ6|1|RA|A|2602
6BZ6|1|RA|G|2603

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QV

Transfer RNA; tRNA

Chain R0

50S ribosomal protein L27

Chain RD

50S ribosomal protein L2