3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
UGCAU*AUG
Length
8 nucleotides
Bulged bases
6BZ6|1|XA|C|1054
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_217 not in the Motif Atlas
Homologous match to IL_4LFB_044
Geometric discrepancy: 0.1462
The information below is about IL_4LFB_044
Detailed Annotation
Isolated cWS basepair
Broad Annotation
No text annotation
Motif group
IL_76319.5
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
3

Unit IDs

6BZ6|1|XA|U|1052
6BZ6|1|XA|G|1053
6BZ6|1|XA|C|1054
6BZ6|1|XA|A|1055
6BZ6|1|XA|U|1056
*
6BZ6|1|XA|A|1204
6BZ6|1|XA|U|1205
6BZ6|1|XA|G|1206

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XC
30S ribosomal protein S3
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14 type Z

Coloring options:


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