3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGC*GGAG
Length
7 nucleotides
Bulged bases
6BZ6|1|YA|G|932
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_260 not in the Motif Atlas
Geometric match to IL_7RQB_025
Geometric discrepancy: 0.3059
The information below is about IL_7RQB_025
Detailed Annotation
Intercalated cWW
Broad Annotation
Intercalated cWW
Motif group
IL_52767.4
Basepair signature
cWW-L-R-cWW
Number of instances in this motif group
28

Unit IDs

6BZ6|1|YA|C|844
6BZ6|1|YA|G|845
6BZ6|1|YA|C|846
*
6BZ6|1|YA|G|931
6BZ6|1|YA|G|932
6BZ6|1|YA|A|933
6BZ6|1|YA|G|934

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y3
50S ribosomal protein L30

Coloring options:


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