3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGUAAC*GGAGAAG
Length
13 nucleotides
Bulged bases
6BZ6|1|YA|G|1699
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_302 not in the Motif Atlas
Geometric match to IL_7RQB_068
Geometric discrepancy: 0.125
The information below is about IL_7RQB_068
Detailed Annotation
tSH-tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_65969.2
Basepair signature
cWW-tSH-tSH-tHH-tHS-cWW
Number of instances in this motif group
8

Unit IDs

6BZ6|1|YA|C|1686
6BZ6|1|YA|G|1687
6BZ6|1|YA|U|1688
6BZ6|1|YA|A|1689
6BZ6|1|YA|A|1690
6BZ6|1|YA|C|1691
*
6BZ6|1|YA|G|1696
6BZ6|1|YA|G|1697
6BZ6|1|YA|A|1698
6BZ6|1|YA|G|1699
6BZ6|1|YA|A|1700
6BZ6|1|YA|A|1701
6BZ6|1|YA|G|1702

Current chains

Chain YA
23S rRNA

Nearby chains

Chain XA
Small subunit ribosomal RNA; SSU rRNA
Chain YD
50S ribosomal protein L2

Coloring options:


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