3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GG*CAC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_325 not in the Motif Atlas
Geometric match to IL_7RQB_092
Geometric discrepancy: 0.0713
The information below is about IL_7RQB_092
Detailed Annotation
Major groove platform
Broad Annotation
No text annotation
Motif group
IL_27635.3
Basepair signature
cWW-cSH-cWW
Number of instances in this motif group
38

Unit IDs

6BZ6|1|YA|G|2454
6BZ6|1|YA|G|2455
*
6BZ6|1|YA|C|2496
6BZ6|1|YA|A|2497
6BZ6|1|YA|C|2498

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YQ
50S ribosomal protein L16

Coloring options:


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