3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GGAACUCUG*CUGUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_361 not in the Motif Atlas
Homologous match to IL_9DFE_066
Geometric discrepancy: 0.1048
The information below is about IL_9DFE_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22854.4
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
7

Unit IDs

6BZ6|1|RA|G|1666
6BZ6|1|RA|G|1667
6BZ6|1|RA|A|1668
6BZ6|1|RA|A|1669
6BZ6|1|RA|C|1670
6BZ6|1|RA|U|1671
6BZ6|1|RA|C|1672
6BZ6|1|RA|U|1673
6BZ6|1|RA|G|1674
*
6BZ6|1|RA|C|1990
6BZ6|1|RA|U|1991
6BZ6|1|RA|G|1992
6BZ6|1|RA|U|1993
6BZ6|1|RA|C|1994

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RE
50S ribosomal protein L3
Chain RO
50S ribosomal protein L14

Coloring options:


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