IL_6BZ7_016

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

6BZ7|1|QA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_016 not in the Motif Atlas

Geometric match to IL_6CZR_128

Geometric discrepancy: 0.1628

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

6BZ7|1|QA|U|375
6BZ7|1|QA|G|376
6BZ7|1|QA|G|377
*
6BZ7|1|QA|C|386
6BZ7|1|QA|U|387
6BZ7|1|QA|G|388
6BZ7|1|QA|A|389

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16