3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GAGUAG*CGCAGAUAC
Length
15 nucleotides
Bulged bases
6BZ7|1|QA|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_031 not in the Motif Atlas
Homologous match to IL_6CZR_143
Geometric discrepancy: 0.152
The information below is about IL_6CZR_143
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_37722.1
Basepair signature
cWW-L-tSH-L-tHW-tHS-R-cWW-L
Number of instances in this motif group
2

Unit IDs

6BZ7|1|QA|G|683
6BZ7|1|QA|A|684
6BZ7|1|QA|G|685
6BZ7|1|QA|U|686
6BZ7|1|QA|A|687
6BZ7|1|QA|G|688
*
6BZ7|1|QA|C|699
6BZ7|1|QA|G|700
6BZ7|1|QA|C|701
6BZ7|1|QA|A|702
6BZ7|1|QA|G|703
6BZ7|1|QA|A|704
6BZ7|1|QA|U|705
6BZ7|1|QA|A|706
6BZ7|1|QA|C|707

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QK
30S ribosomal protein S11
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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