IL_6BZ7_096

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CCCCCAAG*CG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_096 not in the Motif Atlas

Geometric match to IL_4WF9_037

Geometric discrepancy: 0.1512

The information below is about IL_4WF9_037

Detailed Annotation

SSU/LSU pseudoknot

Broad Annotation

No text annotation

Motif group

IL_41203.4

Basepair signature

cWW-L-cWW-L-L-R-cSH

Number of instances in this motif group

11

Unit IDs

6BZ7|1|RA|C|1004
6BZ7|1|RA|C|1005
6BZ7|1|RA|C|1006
6BZ7|1|RA|C|1007
6BZ7|1|RA|C|1008
6BZ7|1|RA|A|1009
6BZ7|1|RA|A|1010
6BZ7|1|RA|G|1011
*
6BZ7|1|RA|C|1150
6BZ7|1|RA|G|1151

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RN

50S ribosomal protein L13

Chain RU

50S ribosomal protein L20