IL_6BZ7_127

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

6BZ7|1|RA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_127 not in the Motif Atlas

Geometric match to IL_5J7L_308

Geometric discrepancy: 0.1637

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

6BZ7|1|RA|C|1686
6BZ7|1|RA|G|1687
6BZ7|1|RA|U|1688
6BZ7|1|RA|A|1689
6BZ7|1|RA|A|1690
6BZ7|1|RA|C|1691
*
6BZ7|1|RA|G|1696
6BZ7|1|RA|G|1697
6BZ7|1|RA|A|1698
6BZ7|1|RA|G|1699
6BZ7|1|RA|A|1700
6BZ7|1|RA|A|1701
6BZ7|1|RA|G|1702

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RD

50S ribosomal protein L2