3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CCGAG*CGGCG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_154 not in the Motif Atlas
Homologous match to IL_4WF9_093
Geometric discrepancy: 0.3516
The information below is about IL_4WF9_093
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_17948.2
Basepair signature
cWW-L-R-tSH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

6BZ7|1|RA|C|2466
6BZ7|1|RA|C|2467
6BZ7|1|RA|G|2468
6BZ7|1|RA|A|2469
6BZ7|1|RA|G|2470
*
6BZ7|1|RA|C|2480
6BZ7|1|RA|G|2481
6BZ7|1|RA|G|2482
6BZ7|1|RA|C|2483
6BZ7|1|RA|G|2484

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R9
50S ribosomal protein L36
Chain RQ
50S ribosomal protein L16
Chain RZ
50S ribosomal protein L25

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1031 s