IL_6BZ7_317

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

6BZ7|1|YA|C|2111, 6BZ7|1|YA|G|2112, 6BZ7|1|YA|G|2115, 6BZ7|1|YA|U|2118, 6BZ7|1|YA|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_317 not in the Motif Atlas

Geometric match to IL_5J7L_349

Geometric discrepancy: 0.2096

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

6BZ7|1|YA|G|2110
6BZ7|1|YA|C|2111
6BZ7|1|YA|G|2112
6BZ7|1|YA|U|2113
6BZ7|1|YA|A|2114
6BZ7|1|YA|G|2115
6BZ7|1|YA|G|2116
6BZ7|1|YA|A|2117
6BZ7|1|YA|U|2118
6BZ7|1|YA|A|2119
6BZ7|1|YA|G|2120
*
6BZ7|1|YA|C|2178
6BZ7|1|YA|C|2179

Current chains

Chain YA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain XW

Transfer RNA; tRNA