IL_6BZ7_366

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UCGUG*CGG

Length

8 nucleotides

Bulged bases

6BZ7|1|XA|G|64, 6BZ7|1|XA|U|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_366 not in the Motif Atlas

Geometric match to IL_5T3K_001

Geometric discrepancy: 0.3068

The information below is about IL_5T3K_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

6BZ7|1|XA|U|62
6BZ7|1|XA|C|63
6BZ7|1|XA|G|64
6BZ7|1|XA|U|65
6BZ7|1|XA|G|66
*
6BZ7|1|XA|C|103
6BZ7|1|XA|G|104
6BZ7|1|XA|G|105

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20