IL_6BZ7_379

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CCUG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_379 not in the Motif Atlas

Geometric match to IL_1D4R_001

Geometric discrepancy: 0.2163

The information below is about IL_1D4R_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6BZ7|1|YA|C|2107
6BZ7|1|YA|C|2108
6BZ7|1|YA|U|2109
6BZ7|1|YA|G|2110
*
6BZ7|1|YA|C|2179
6BZ7|1|YA|U|2180
6BZ7|1|YA|G|2181
6BZ7|1|YA|G|2182

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XW

Transfer RNA; tRNA