IL_6BZ8_014

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

6BZ8|1|QA|U|347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_014 not in the Motif Atlas

Geometric match to IL_3D2V_001

Geometric discrepancy: 0.3629

The information below is about IL_3D2V_001

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

6BZ8|1|QA|C|341
6BZ8|1|QA|C|342
*
6BZ8|1|QA|G|346
6BZ8|1|QA|U|347
6BZ8|1|QA|G|348

Current chains

Chain QA

16S rRNA

Nearby chains

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19