3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GGGAG*CGUGGAUC
Length
13 nucleotides
Bulged bases
6BZ8|1|RA|G|101
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_062 not in the Motif Atlas
Homologous match to IL_7RQB_004
Geometric discrepancy: 0.1269
The information below is about IL_7RQB_004
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_45067.2
Basepair signature
cWW-tSS-L-tSH-L-R-R-cWW-L
Number of instances in this motif group
18

Unit IDs

6BZ8|1|RA|G|81
6BZ8|1|RA|G|82
6BZ8|1|RA|G|83
6BZ8|1|RA|A|84
6BZ8|1|RA|G|85
*
6BZ8|1|RA|C|97
6BZ8|1|RA|G|98
6BZ8|1|RA|U|99
6BZ8|1|RA|G|101
6BZ8|1|RA|G|102
6BZ8|1|RA|A|103
6BZ8|1|RA|U|104
6BZ8|1|RA|C|105

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R2
50S ribosomal protein L29
Chain RY
50S ribosomal protein L24

Coloring options:


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