IL_6BZ8_133

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_133 not in the Motif Atlas

Geometric match to IL_7A0S_071

Geometric discrepancy: 0.115

The information below is about IL_7A0S_071

Detailed Annotation

Bulged stacked bases

Broad Annotation

Bulged stacked bases

Motif group

IL_22551.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

6BZ8|1|RA|G|1933
6BZ8|1|RA|C|1934
*
6BZ8|1|RA|G|1964
6BZ8|1|RA|C|1965
6BZ8|1|RA|A|1966
6BZ8|1|RA|C|1967

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QV

Transfer RNA; tRNA