IL_6BZ8_180

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GACAACC*GGCUAAUC

Length

15 nucleotides

Bulged bases

6BZ8|1|XA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_180 not in the Motif Atlas

Homologous match to IL_6CZR_121

Geometric discrepancy: 0.1965

The information below is about IL_6CZR_121

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.5

Basepair signature

cWW-L-R-tWH-tWH-tHW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

6BZ8|1|XA|G|148
6BZ8|1|XA|A|149
6BZ8|1|XA|C|150
6BZ8|1|XA|A|151
6BZ8|1|XA|A|152
6BZ8|1|XA|C|153
6BZ8|1|XA|C|154
*
6BZ8|1|XA|G|167
6BZ8|1|XA|G|168
6BZ8|1|XA|C|169
6BZ8|1|XA|U|170
6BZ8|1|XA|A|171
6BZ8|1|XA|A|172
6BZ8|1|XA|U|173
6BZ8|1|XA|C|174

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20