IL_6BZ8_188

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

6BZ8|1|XA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_188 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1116

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

6BZ8|1|XA|G|409
6BZ8|1|XA|G|410
6BZ8|1|XA|A|411
6BZ8|1|XA|A|412
6BZ8|1|XA|G|413
6BZ8|1|XA|A|414
6BZ8|1|XA|A|415
6BZ8|1|XA|G|416
*
6BZ8|1|XA|U|427
6BZ8|1|XA|G|428
6BZ8|1|XA|U|429
6BZ8|1|XA|A|430
6BZ8|1|XA|A|431
6BZ8|1|XA|A|432
6BZ8|1|XA|C|433

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XD

30S ribosomal protein S4