IL_6BZ8_215

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CG*CUG

Length

5 nucleotides

Bulged bases

6BZ8|1|XA|U|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_215 not in the Motif Atlas

Homologous match to IL_4LFB_046

Geometric discrepancy: 0.1292

The information below is about IL_4LFB_046

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

6BZ8|1|XA|C|1060
6BZ8|1|XA|G|1061
*
6BZ8|1|XA|C|1195
6BZ8|1|XA|U|1196
6BZ8|1|XA|G|1197

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XC

30S ribosomal protein S3

Chain XE

30S ribosomal protein S5

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10

Chain XN

30S ribosomal protein S14 type Z

Chain XX

messenger RNA

Chain XY

ASL Leu