IL_6BZ8_216

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_216 not in the Motif Atlas

Geometric match to IL_4NGF_002

Geometric discrepancy: 0.115

The information below is about IL_4NGF_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

6BZ8|1|XA|G|1061
6BZ8|1|XA|U|1062
6BZ8|1|XA|C|1063
*
6BZ8|1|XA|G|1193
6BZ8|1|XA|U|1194
6BZ8|1|XA|C|1195

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XC

30S ribosomal protein S3

Chain XE

30S ribosomal protein S5

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10

Chain XN

30S ribosomal protein S14 type Z

Chain XX

messenger RNA