3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CCCCCAAG*CG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_268 not in the Motif Atlas
Geometric match to IL_7RQB_037
Geometric discrepancy: 0.1136
The information below is about IL_7RQB_037
Detailed Annotation
SSU/LSU pseudoknot
Broad Annotation
No text annotation
Motif group
IL_15861.7
Basepair signature
cWW-L-cWW-L-L-R-cSH
Number of instances in this motif group
12

Unit IDs

6BZ8|1|YA|C|1004
6BZ8|1|YA|C|1005
6BZ8|1|YA|C|1006
6BZ8|1|YA|C|1007
6BZ8|1|YA|C|1008
6BZ8|1|YA|A|1009
6BZ8|1|YA|A|1010
6BZ8|1|YA|G|1011
*
6BZ8|1|YA|C|1150
6BZ8|1|YA|G|1151

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20

Coloring options:


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