3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
ACUCUG*CUGU
Length
10 nucleotides
Bulged bases
6BZ8|1|YA|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_298 not in the Motif Atlas
Homologous match to IL_7A0S_062
Geometric discrepancy: 0.1261
The information below is about IL_7A0S_062
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76758.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
7

Unit IDs

6BZ8|1|YA|A|1669
6BZ8|1|YA|C|1670
6BZ8|1|YA|U|1671
6BZ8|1|YA|C|1672
6BZ8|1|YA|U|1673
6BZ8|1|YA|G|1674
*
6BZ8|1|YA|C|1990
6BZ8|1|YA|U|1991
6BZ8|1|YA|G|1992
6BZ8|1|YA|U|1993

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YO
50S ribosomal protein L14

Coloring options:


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