IL_6BZ8_316
3D structure
- PDB id
- 6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 6BZ8|1|YA|C|2111, 6BZ8|1|YA|G|2112, 6BZ8|1|YA|G|2115, 6BZ8|1|YA|U|2118, 6BZ8|1|YA|A|2119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BZ8_316 not in the Motif Atlas
- Geometric match to IL_1KXK_003
- Geometric discrepancy: 0.2069
- The information below is about IL_1KXK_003
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
6BZ8|1|YA|G|2110
6BZ8|1|YA|C|2111
6BZ8|1|YA|G|2112
6BZ8|1|YA|U|2113
6BZ8|1|YA|A|2114
6BZ8|1|YA|G|2115
6BZ8|1|YA|G|2116
6BZ8|1|YA|A|2117
6BZ8|1|YA|U|2118
6BZ8|1|YA|A|2119
6BZ8|1|YA|G|2120
*
6BZ8|1|YA|C|2178
6BZ8|1|YA|C|2179
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XW
- Transfer RNA; tRNA
Coloring options: