IL_6BZ8_359

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CCGAGC*GCGGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_359 not in the Motif Atlas

Geometric match to IL_8P9A_410

Geometric discrepancy: 0.3955

The information below is about IL_8P9A_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

6BZ8|1|RA|C|2466
6BZ8|1|RA|C|2467
6BZ8|1|RA|G|2468
6BZ8|1|RA|A|2469
6BZ8|1|RA|G|2470
6BZ8|1|RA|C|2471
*
6BZ8|1|RA|G|2479
6BZ8|1|RA|C|2480
6BZ8|1|RA|G|2481
6BZ8|1|RA|G|2482
6BZ8|1|RA|C|2483
6BZ8|1|RA|G|2484

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RQ

50S ribosomal protein L16

Chain RZ

50S ribosomal protein L25