IL_6BZ8_362

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

UGAA*UUA

Length

7 nucleotides

Bulged bases

6BZ8|1|XA|G|31

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_362 not in the Motif Atlas

Geometric match to IL_5MSF_001

Geometric discrepancy: 0.2309

The information below is about IL_5MSF_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

6BZ8|1|XA|U|30
6BZ8|1|XA|G|31
6BZ8|1|XA|A|32
6BZ8|1|XA|A|33
*
6BZ8|1|XA|U|551
6BZ8|1|XA|U|552
6BZ8|1|XA|A|553

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12