IL_6C0F_008

3D structure

PDB id

6C0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast nucleolar pre-60S ribosomal subunit (state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUG*UUUGUAA

Length

10 nucleotides

Bulged bases

6C0F|1|1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6C0F|1|1|U|168
6C0F|1|1|U|169
6C0F|1|1|G|170
*
6C0F|1|1|U|248
6C0F|1|1|U|249
6C0F|1|1|U|250
6C0F|1|1|G|251
6C0F|1|1|U|252
6C0F|1|1|A|253
6C0F|1|1|A|254

Current chains

Chain 1

Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA

Nearby chains

Chain 7

Nucleolar protein 16

Chain G

60S ribosomal protein L8-A

Chain h

60S ribosomal protein L35-A

Chain s

Ribosome biogenesis protein ERB1