IL_6C5L_349
3D structure
- PDB id
- 6C5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCAUG*CAUG
- Length
- 10 nucleotides
- Bulged bases
- 6C5L|1|AA|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6C5L_349 not in the Motif Atlas
- Homologous match to IL_6CZR_365
- Geometric discrepancy: 0.2812
- The information below is about IL_6CZR_365
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_45699.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6C5L|1|AA|U|1052
6C5L|1|AA|G|1053
6C5L|1|AA|C|1054
6C5L|1|AA|A|1055
6C5L|1|AA|U|1056
6C5L|1|AA|G|1057
*
6C5L|1|AA|C|1203
6C5L|1|AA|A|1204
6C5L|1|AA|U|1205
6C5L|1|AA|G|1206
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14 type Z
- Chain AX
- mRNA
- Chain AY
- Peptide chain release factor 2
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