IL_6C5L_373
3D structure
- PDB id
- 6C5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAG*CUUUAAAGAGUGCGUAAUAGCUCAC
- Length
- 29 nucleotides
- Bulged bases
- 6C5L|1|DA|A|1088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6C5L|1|DA|G|1055
6C5L|1|DA|G|1056
6C5L|1|DA|A|1057
6C5L|1|DA|G|1058
*
6C5L|1|DA|C|1080
6C5L|1|DA|U|1081
6C5L|1|DA|U|1082
6C5L|1|DA|U|1083
6C5L|1|DA|A|1084
6C5L|1|DA|A|1085
6C5L|1|DA|A|1086
6C5L|1|DA|G|1087
6C5L|1|DA|A|1088
6C5L|1|DA|G|1089
6C5L|1|DA|U|1090
6C5L|1|DA|G|1091
6C5L|1|DA|C|1092
6C5L|1|DA|G|1093
6C5L|1|DA|U|1094
6C5L|1|DA|A|1095
6C5L|1|DA|A|1096
6C5L|1|DA|U|1097
6C5L|1|DA|A|1098
6C5L|1|DA|G|1099
6C5L|1|DA|C|1100
6C5L|1|DA|U|1101
6C5L|1|DA|C|1102
6C5L|1|DA|A|1103
6C5L|1|DA|C|1104
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain CY
- Peptide chain release factor 2
- Chain D9
- 50S ribosomal protein L36
- Chain DH
- 50S ribosomal protein L6
- Chain DJ
- 50S ribosomal protein L10
- Chain DK
- 50S ribosomal protein L11
- Chain DQ
- 50S ribosomal protein L16
Coloring options: