IL_6CAE_204

3D structure

PDB id

6CAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCUAGGG*UACCAAAC

Length

15 nucleotides

Bulged bases

6CAE|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAE|1|2A|G|875
6CAE|1|2A|C|876
6CAE|1|2A|U|877
6CAE|1|2A|A|878
6CAE|1|2A|G|879
6CAE|1|2A|G|880
6CAE|1|2A|G|881
*
6CAE|1|2A|U|895
6CAE|1|2A|A|896
6CAE|1|2A|C|897
6CAE|1|2A|C|898
6CAE|1|2A|A|899
6CAE|1|2A|A|900
6CAE|1|2A|A|901
6CAE|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2w

Transfer RNA; tRNA