IL_6CAE_254

3D structure

PDB id

6CAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAE|1|2A|G|2124
6CAE|1|2A|G|2125
6CAE|1|2A|A|2126
6CAE|1|2A|G|2127
6CAE|1|2A|C|2128
*
6CAE|1|2A|G|2160
6CAE|1|2A|C|2161
6CAE|1|2A|G|2162
6CAE|1|2A|C|2163
6CAE|1|2A|C|2164
6CAE|1|2A|G|2165
6CAE|1|2A|G|2166
6CAE|1|2A|U|2167
6CAE|1|2A|G|2168
6CAE|1|2A|A|2169
6CAE|1|2A|A|2170
6CAE|1|2A|A|2171
6CAE|1|2A|U|2172
6CAE|1|2A|A|2173
6CAE|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA