IL_6CAE_326
3D structure
- PDB id
- 6CAE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GCU*G(2MG)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CAE_326 not in the Motif Atlas
- Geometric match to IL_5TBW_110
- Geometric discrepancy: 0.2043
- The information below is about IL_5TBW_110
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6CAE|1|2a|G|1050
6CAE|1|2a|C|1051
6CAE|1|2a|U|1052
*
6CAE|1|2a|G|1206
6CAE|1|2a|2MG|1207
6CAE|1|2a|C|1208
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2c
- 30S ribosomal protein S3
- Chain 2n
- 30S ribosomal protein S14 type Z
- Chain 2w
- Transfer RNA; tRNA
- Chain C
- NOSO-95179 antibiotic
Coloring options: