IL_6CAR_064

3D structure

PDB id

6CAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

AGUUGC*GGCACUCU

Length

14 nucleotides

Bulged bases

6CAR|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAR|1|A|A|1123
6CAR|1|A|G|1124
6CAR|1|A|U|1125
6CAR|1|A|U|1126
6CAR|1|A|G|1127
6CAR|1|A|C|1128
*
6CAR|1|A|G|1143
6CAR|1|A|G|1144
6CAR|1|A|C|1145
6CAR|1|A|A|1146
6CAR|1|A|C|1147
6CAR|1|A|U|1148
6CAR|1|A|C|1149
6CAR|1|A|U|1150

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10