IL_6CFJ_202

3D structure

PDB id

6CFJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGCUAGGGG*CUACCAAACC

Length

19 nucleotides

Bulged bases

6CFJ|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFJ|1|2A|G|874
6CFJ|1|2A|G|875
6CFJ|1|2A|C|876
6CFJ|1|2A|U|877
6CFJ|1|2A|A|878
6CFJ|1|2A|G|879
6CFJ|1|2A|G|880
6CFJ|1|2A|G|881
6CFJ|1|2A|G|882
*
6CFJ|1|2A|C|894
6CFJ|1|2A|U|895
6CFJ|1|2A|A|896
6CFJ|1|2A|C|897
6CFJ|1|2A|C|898
6CFJ|1|2A|A|899
6CFJ|1|2A|A|900
6CFJ|1|2A|A|901
6CFJ|1|2A|C|902
6CFJ|1|2A|C|903

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2w

Transfer RNA; tRNA