IL_6CFJ_344

3D structure

PDB id

6CFJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCUGUGAACC*GGGGAGG

Length

17 nucleotides

Bulged bases

6CFJ|1|1A|U|2154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFJ|1|1A|C|2150
6CFJ|1|1A|C|2151
6CFJ|1|1A|U|2152
6CFJ|1|1A|G|2153
6CFJ|1|1A|U|2154
6CFJ|1|1A|G|2155
6CFJ|1|1A|A|2156
6CFJ|1|1A|A|2157
6CFJ|1|1A|C|2158
6CFJ|1|1A|C|2159
*
6CFJ|1|1A|G|2176
6CFJ|1|1A|G|2177
6CFJ|1|1A|G|2178
6CFJ|1|1A|G|2179
6CFJ|1|1A|A|2180
6CFJ|1|1A|G|2181
6CFJ|1|1A|G|2182

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains