IL_6CFK_326

3D structure

PDB id

6CFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAAC*GGUGCCCCGCGAGGGGAGCC

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFK|1|2a|G|1002
6CFK|1|2a|G|1003
6CFK|1|2a|A|1004
6CFK|1|2a|A|1005
6CFK|1|2a|C|1006
*
6CFK|1|2a|G|1023
6CFK|1|2a|G|1024
6CFK|1|2a|U|1025
6CFK|1|2a|G|1026
6CFK|1|2a|C|1027
6CFK|1|2a|C|1028
6CFK|1|2a|C|1029
6CFK|1|2a|C|1030
6CFK|1|2a|G|1030|||A
6CFK|1|2a|C|1030|||B
6CFK|1|2a|G|1030|||C
6CFK|1|2a|A|1030|||D
6CFK|1|2a|G|1031
6CFK|1|2a|G|1032
6CFK|1|2a|G|1033
6CFK|1|2a|G|1034
6CFK|1|2a|A|1035
6CFK|1|2a|G|1036
6CFK|1|2a|C|1037
6CFK|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains