IL_6CFL_063
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GAGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_063 not in the Motif Atlas
- Homologous match to IL_7RQB_064
- Geometric discrepancy: 0.0317
- The information below is about IL_7RQB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.2
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6CFL|1|1A|G|1698
6CFL|1|1A|A|1699
6CFL|1|1A|G|1700
6CFL|1|1A|A|1701
6CFL|1|1A|A|1702
6CFL|1|1A|C|1703
*
6CFL|1|1A|G|2026
6CFL|1|1A|A|2027
6CFL|1|1A|C|2028
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1E
- 50S Ribosomal Protein L3
- Chain 1R
- 50S ribosomal protein L17
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