IL_6CFL_075
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_075 not in the Motif Atlas
- Homologous match to IL_7RQB_076
- Geometric discrepancy: 0.0367
- The information below is about IL_7RQB_076
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- Bulged stacked bases
- Motif group
- IL_59677.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 19
Unit IDs
6CFL|1|1A|G|1955
6CFL|1|1A|C|1956
*
6CFL|1|1A|G|1986
6CFL|1|1A|C|1987
6CFL|1|1A|A|1988
6CFL|1|1A|C|1989
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: