IL_6CFL_293
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUG*CG
- Length
- 6 nucleotides
- Bulged bases
- 6CFL|1|2a|G|64, 6CFL|1|2a|U|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_293 not in the Motif Atlas
- Homologous match to IL_4LFB_005
- Geometric discrepancy: 0.1097
- The information below is about IL_4LFB_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
6CFL|1|2a|C|63
6CFL|1|2a|G|64
6CFL|1|2a|U|65
6CFL|1|2a|G|66
*
6CFL|1|2a|C|103
6CFL|1|2a|G|104
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2t
- 30S ribosomal protein S20
Coloring options: