IL_6CFL_360

3D structure

PDB id

6CFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CCUGUGAACCCC*GGGGGGAGG

Length

21 nucleotides

Bulged bases

6CFL|1|2A|G|2131, 6CFL|1|2A|U|2132, 6CFL|1|2A|C|2136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFL|1|2A|C|2128
6CFL|1|2A|C|2129
6CFL|1|2A|U|2130
6CFL|1|2A|G|2131
6CFL|1|2A|U|2132
6CFL|1|2A|G|2133
6CFL|1|2A|A|2134
6CFL|1|2A|A|2135
6CFL|1|2A|C|2136
6CFL|1|2A|C|2137
6CFL|1|2A|C|2138
6CFL|1|2A|C|2139
*
6CFL|1|2A|G|2152
6CFL|1|2A|G|2153
6CFL|1|2A|G|2154
6CFL|1|2A|G|2155
6CFL|1|2A|G|2156
6CFL|1|2A|G|2157
6CFL|1|2A|A|2158
6CFL|1|2A|G|2159
6CFL|1|2A|G|2160

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains