IL_6CHR_006
3D structure
- PDB id
- 6CHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GGUUAUUAGG*UAGAC
- Length
- 15 nucleotides
- Bulged bases
- 6CHR|1|A|U|190, 6CHR|1|A|U|193, 6CHR|1|A|G|296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CHR|1|A|G|187
6CHR|1|A|G|188
6CHR|1|A|U|189
6CHR|1|A|U|190
6CHR|1|A|A|191
6CHR|1|A|U|192
6CHR|1|A|U|193
6CHR|1|A|A|194
6CHR|1|A|G|195
6CHR|1|A|G|196
*
6CHR|1|A|U|294
6CHR|1|A|A|295
6CHR|1|A|G|296
6CHR|1|A|A|297
6CHR|1|A|C|298
Current chains
- Chain A
- RNA (621-MER)
Nearby chains
- Chain B
- RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*A)-3')
Coloring options: