IL_6CZR_019

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

6CZR|1|1A|G|775

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6CZR_019 not in the Motif Atlas

Homologous match to IL_7RQB_020

Geometric discrepancy: 0.1158

The information below is about IL_7RQB_020

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

42

Unit IDs

6CZR|1|1A|G|748
6CZR|1|1A|U|749
*
6CZR|1|1A|G|774
6CZR|1|1A|G|775
6CZR|1|1A|C|776

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2