IL_6CZR_074
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- CGAAA(5MU)UC(5MC)UUG*C(5MC)UG
- Length
- 16 nucleotides
- Bulged bases
- 6CZR|1|1A|A|1959, 6CZR|1|1A|U|1965, 6CZR|1|1A|U|1984
- QA status
- Modified nucleotides: 5MU, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CZR_074 not in the Motif Atlas
- Homologous match to IL_7RQB_077
- Geometric discrepancy: 0.1167
- The information below is about IL_7RQB_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CZR|1|1A|C|1955
6CZR|1|1A|G|1956
6CZR|1|1A|A|1957
6CZR|1|1A|A|1958
6CZR|1|1A|A|1959
6CZR|1|1A|5MU|1960
6CZR|1|1A|U|1961
6CZR|1|1A|C|1962
6CZR|1|1A|5MC|1963
6CZR|1|1A|U|1964
6CZR|1|1A|U|1965
6CZR|1|1A|G|1966
*
6CZR|1|1A|C|1982
6CZR|1|1A|5MC|1983
6CZR|1|1A|U|1984
6CZR|1|1A|G|1985
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S ribosomal protein L2
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: