IL_6CZR_084

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CCUGUGAAC*GGGAGG

Length

15 nucleotides

Bulged bases

6CZR|1|1A|U|2153

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6CZR_084 not in the Motif Atlas

Homologous match to IL_8VTW_086

Geometric discrepancy: 0.5996

The information below is about IL_8VTW_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|1A|C|2149
6CZR|1|1A|C|2150
6CZR|1|1A|U|2151
6CZR|1|1A|G|2152
6CZR|1|1A|U|2153
6CZR|1|1A|G|2154
6CZR|1|1A|A|2155
6CZR|1|1A|A|2156
6CZR|1|1A|C|2157
*
6CZR|1|1A|G|2176
6CZR|1|1A|G|2177
6CZR|1|1A|G|2178
6CZR|1|1A|A|2179
6CZR|1|1A|G|2180
6CZR|1|1A|G|2181

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains