IL_6CZR_133
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 6CZR|1|1a|A|516, 6CZR|1|1a|U|518, 6CZR|1|1a|A|519
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.3
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6CZR|1|1a|G|499
6CZR|1|1a|PSU|500
6CZR|1|1a|G|501
6CZR|1|1a|C|502
6CZR|1|1a|C|503
6CZR|1|1a|A|504
6CZR|1|1a|G|505
*
6CZR|1|1a|C|512
6CZR|1|1a|G|513
6CZR|1|1a|G|514
6CZR|1|1a|U|515
6CZR|1|1a|A|516
6CZR|1|1a|A|517
6CZR|1|1a|U|518
6CZR|1|1a|A|519
6CZR|1|1a|C|520
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1c
- 30S ribosomal protein S3
- Chain 1d
- 30S ribosomal protein S4
- Chain 1l
- 30S ribosomal protein S12
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