IL_6CZR_134

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6CZR|1|1a|A|556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6CZR|1|1a|C|553
6CZR|1|1a|G|554
6CZR|1|1a|U|555
6CZR|1|1a|A|556
6CZR|1|1a|A|557
6CZR|1|1a|A|558
6CZR|1|1a|G|559
*
6CZR|1|1a|C|858
6CZR|1|1a|G|859

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1l

30S ribosomal protein S12

Chain 1q

30S ribosomal protein S17