IL_6CZR_136

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGCG*CGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

6CZR|1|1a|G|578
6CZR|1|1a|G|579
6CZR|1|1a|C|580
6CZR|1|1a|G|581
*
6CZR|1|1a|C|627
6CZR|1|1a|G|628
6CZR|1|1a|C|629

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1h

30S ribosomal protein S8

Chain 1q

30S ribosomal protein S17