IL_6CZR_149

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GCAC*GUUCCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93211.1

Basepair signature

cWW-cWS-cWW-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

6CZR|1|1a|G|911
6CZR|1|1a|C|912
6CZR|1|1a|A|913
6CZR|1|1a|C|914
*
6CZR|1|1a|G|1362
6CZR|1|1a|U|1363
6CZR|1|1a|U|1364
6CZR|1|1a|C|1365
6CZR|1|1a|C|1366
6CZR|1|1a|C|1367

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1g

30S ribosomal protein S7

Chain 1i

30S ribosomal protein S9